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LOC102362046 putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102362046, updated on 2-May-2024

Summary

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Gene symbol
LOC102362046
Gene description
putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13
See related
Ensembl:ENSLACG00000001875
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Also known as
ALG13; ZGC:92907
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Genomic context

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See LOC102362046 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 15 NC_088153.1 (6852380..6920095)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005823610.1 (32204..71196, complement)

Chromosome 15 - NC_088153.1Genomic Context describing neighboring genes Neighboring gene calpain-5 Neighboring gene neuronal migration protein doublecortin Neighboring gene canopy FGF signaling regulator 3 Neighboring gene transient receptor potential cation channel, subfamily C, member 5a Neighboring gene LHFPL tetraspan subfamily member 6 protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dolichol-linked oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13
Names
ALG13 UDP-N-acetylglucosaminyltransferase subunit
UDP-N-acetylglucosamine transferase subunit ALG13 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088153.1 Reference fLatCha1.pri

    Range
    6852380..6920095
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064566692.1 → XP_064422762.1  putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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