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CHGA chromogranin A [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102360599, updated on 26-Apr-2024

Summary

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Gene symbol
CHGA
Gene description
chromogranin A
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
human zebrafish all
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Genomic context

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See CHGA in Genome Data Viewer
Location:
chromosome: 11
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 11 NC_088149.1 (19442874..19459669, complement)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819014.1 (7047649..7064416)

Chromosome 11 - NC_088149.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 251 Neighboring gene inositol-tetrakisphosphate 1-kinase a Neighboring gene 5S ribosomal RNA Neighboring gene golgin A5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in adenylate cyclase-activating adrenergic receptor signaling pathway involved in cardiac muscle relaxation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response to bacterium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of catecholamine secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of insulin secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromaffin granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chromogranin-A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088149.1 Reference fLatCha1.pri

    Range
    19442874..19459669 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014485880.1 → XP_014341366.1  chromogranin-A

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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