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EIF3D eukaryotic translation initiation factor 3, subunit D [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102360099, updated on 26-Apr-2024

Summary

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Gene symbol
EIF3D
Gene description
eukaryotic translation initiation factor 3, subunit D
See related
Ensembl:ENSLACG00000001606
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
human zebrafish all
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Genomic context

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See EIF3D in Genome Data Viewer
Location:
chromosome: 9
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 9 NC_088147.1 (14948792..14970681)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005822287.1 (22874..42560, complement)

Chromosome 9 - NC_088147.1Genomic Context describing neighboring genes Neighboring gene chondroadherin-like b Neighboring gene calcium channel, voltage-dependent, gamma subunit 2a Neighboring gene TGF-beta activated kinase 1/MAP3K7 binding protein 1 Neighboring gene FMR1-interacting protein NUFIP1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of eukaryotic translation initiation factor 3 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 3 subunit D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088147.1 Reference fLatCha1.pri

    Range
    14948792..14970681
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064563392.1 → XP_064419462.1  eukaryotic translation initiation factor 3 subunit D isoform X1

  2. XM_064563393.1 → XP_064419463.1  eukaryotic translation initiation factor 3 subunit D isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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