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CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102359407, updated on 26-Apr-2024

Summary

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Gene symbol
CHST15
Gene description
carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
See related
Ensembl:ENSLACG00000016138
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
human zebrafish all
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Genomic context

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See CHST15 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 8 NC_088146.1 (121107913..121143346)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819222.1 (1437615..1497166)

Chromosome 8 - NC_088146.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106703210 Neighboring gene ornithine aminotransferase Neighboring gene inactive carboxypeptidase-like protein X2 Neighboring gene uncharacterized LOC135358705

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hexose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088146.1 Reference fLatCha1.pri

    Range
    121107913..121143346
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005994538.3 → XP_005994600.1  carbohydrate sulfotransferase 15

    UniProtKB/TrEMBL
    H3B8U9
    Related
    ENSLACP00000018320.1
    Conserved Domains (1) summary
    cl21551
    Location:236 → 524
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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