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CHST6 carbohydrate sulfotransferase 6 [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102356562, updated on 6-Jun-2024

Summary

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Gene symbol
CHST6
Gene description
carbohydrate sulfotransferase 6
See related
Ensembl:ENSLACG00000001890
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
zebrafish all
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Genomic context

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See CHST6 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 5 NC_088143.1 (66267731..66340886)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005822323.1 (32740..34577, complement)

Chromosome 5 - NC_088143.1Genomic Context describing neighboring genes Neighboring gene GABA(A) receptor-associated protein like 2 Neighboring gene transmembrane protein 231 Neighboring gene uncharacterized LOC102352446 Neighboring gene solute carrier family 10 member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in keratan sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088143.1 Reference fLatCha1.pri

    Range
    66267731..66340886
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064558593.1 → XP_064414663.1  carbohydrate sulfotransferase 6

    UniProtKB/TrEMBL
    H2ZXJ2

  2. XM_064558592.1 → XP_064414662.1  carbohydrate sulfotransferase 6

    UniProtKB/TrEMBL
    H2ZXJ2
Nucleotide Protein
Heading Accession and Version

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