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SLC35C1 solute carrier family 35 member C1 [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102356065, updated on 2-May-2024

Summary

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Gene symbol
SLC35C1
Gene description
solute carrier family 35 member C1
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
human zebrafish all
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Genomic context

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See SLC35C1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 17 NC_088155.1 (4354465..4356294)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819017.1 (3398285..3398890)

Chromosome 17 - NC_088155.1Genomic Context describing neighboring genes Neighboring gene carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 Neighboring gene scavenger receptor class A member 5-like Neighboring gene cryptochrome circadian regulator 2 Neighboring gene C-Jun-amino-terminal kinase-interacting protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP-fucose transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GDP-fucose import into Golgi lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose transporter 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088155.1 Reference fLatCha1.pri

    Range
    4354465..4356294
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064567018.1 → XP_064423088.1  GDP-fucose transporter 1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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