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B3GALT6 UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6 [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102355255, updated on 6-Jun-2024

Summary

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Gene symbol
B3GALT6
Gene description
UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6
See related
Ensembl:ENSLACG00000018659
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
human zebrafish all
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Genomic context

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See B3GALT6 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 19 NC_088157.1 (10349237..10361461)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819011.1 (3952587..3964836, complement)

Chromosome 19 - NC_088157.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast) Neighboring gene C1q and TNF related 12 Neighboring gene stromal cell derived factor 4 Neighboring gene tumor necrosis factor receptor superfamily member 18

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycosaminoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088157.1 Reference fLatCha1.pri

    Range
    10349237..10361461
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005985994.3 → XP_005986056.1  beta-1,3-galactosyltransferase 6

    UniProtKB/TrEMBL
    H3BH67
    Conserved Domains (1) summary
    cl21608
    Location:80 → 264
    Galactosyl_T; Galactosyltransferase

  2. XM_064567780.1 → XP_064423850.1  beta-1,3-galactosyltransferase 6

    UniProtKB/TrEMBL
    H3BH67
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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