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ACOX1 acyl-CoA oxidase 1, palmitoyl [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102353101, updated on 26-Apr-2024

Summary

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Gene symbol
ACOX1
Gene description
acyl-CoA oxidase 1, palmitoyl
See related
Ensembl:ENSLACG00000017432
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
human zebrafish all
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Genomic context

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See ACOX1 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 18 NC_088156.1 (20141350..20187094, complement)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819166.1 (2096618..2138939)

Chromosome 18 - NC_088156.1Genomic Context describing neighboring genes Neighboring gene myosin-4 Neighboring gene fas-binding factor 1 homolog Neighboring gene uncharacterized LOC102354415 Neighboring gene TEN1 subunit of CST complex Neighboring gene envoplakin a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables palmitoyl-CoA oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation using acyl-CoA oxidase IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisomal acyl-coenzyme A oxidase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088156.1 Reference fLatCha1.pri

    Range
    20141350..20187094 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005993222.2 → XP_005993284.1  peroxisomal acyl-coenzyme A oxidase 1 isoform X1

    UniProtKB/TrEMBL
    H3BD54
    Related
    ENSLACP00000019825.2
    Conserved Domains (2) summary
    cd01150
    Location:3 → 638
    AXO; Peroxisomal acyl-CoA oxidase
    PLN02443
    Location:5 → 657
    PLN02443; acyl-coenzyme A oxidase

  2. XM_005993223.3 → XP_005993285.1  peroxisomal acyl-coenzyme A oxidase 1 isoform X2

    Conserved Domains (2) summary
    cd01150
    Location:3 → 638
    AXO; Peroxisomal acyl-CoA oxidase
    PLN02443
    Location:5 → 657
    PLN02443; acyl-coenzyme A oxidase
Nucleotide Protein
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