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EOGT EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102352761, updated on 2-May-2024

Summary

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Gene symbol
EOGT
Gene description
EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
See related
Ensembl:ENSLACG00000014440
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
human zebrafish all
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Genomic context

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See EOGT in Genome Data Viewer
Location:
chromosome: 14
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 14 NC_088152.1 (31076670..31111428, complement)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819256.1 (1029386..1063446)

Chromosome 14 - NC_088152.1Genomic Context describing neighboring genes Neighboring gene TAFA chemokine like family member 1 Neighboring gene TAFA chemokine like family member 4b Neighboring gene U4 spliceosomal RNA Neighboring gene TATA element modulatory factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein O-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-GlcNAcylation via threonine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EGF domain-specific O-linked N-acetylglucosamine transferase
Names
EGF domain specific O-linked N-acetylglucosamine transferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088152.1 Reference fLatCha1.pri

    Range
    31076670..31111428 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064566266.1 → XP_064422336.1  EGF domain-specific O-linked N-acetylglucosamine transferase isoform X3

  2. XM_005995229.2 → XP_005995291.1  EGF domain-specific O-linked N-acetylglucosamine transferase isoform X1

    Conserved Domains (1) summary
    pfam04577
    Location:260 → 480
    DUF563; Protein of unknown function (DUF563)

  3. XM_014487976.2 → XP_014343462.1  EGF domain-specific O-linked N-acetylglucosamine transferase isoform X2

    UniProtKB/TrEMBL
    H3B3B8

  4. XM_014487978.2 → XP_014343464.1  EGF domain-specific O-linked N-acetylglucosamine transferase isoform X2

    UniProtKB/TrEMBL
    H3B3B8
    Related
    ENSLACP00000016389.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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