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LOC102351964 glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102351964, updated on 26-Apr-2024

Summary

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Gene symbol
LOC102351964
Gene description
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2
See related
Ensembl:ENSLACG00000004735
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Also known as
GFPT2
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Genomic context

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See LOC102351964 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 16 NC_088154.1 (36805423..36886091)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819941.1 (135691..215169, complement)

Chromosome 16 - NC_088154.1Genomic Context describing neighboring genes Neighboring gene neurogenin-1 Neighboring gene chemokine (C-X-C motif) ligand 14 Neighboring gene mitogen-activated protein kinase 9 Neighboring gene RasGEF domain family, member 1Ba Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate derivative binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutamine-fructose-6-phosphate transaminase (isomerizing) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate derivative biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fructose 6-phosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2
Names
glutamine-fructose-6-phosphate transaminase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088154.1 Reference fLatCha1.pri

    Range
    36805423..36886091
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006003469.3 → XP_006003531.1  glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2

    UniProtKB/TrEMBL
    H3A6Q5
    Related
    ENSLACP00000005326.1
    Conserved Domains (4) summary
    PLN02981
    Location:1 → 676
    PLN02981; glucosamine:fructose-6-phosphate aminotransferase
    cd00714
    Location:2 → 279
    GFAT; Glutamine amidotransferases class-II (Gn-AT)_GFAT-type. This domain is found at the N-terminus of glucosamine-6P synthase (GlmS, or GFAT in humans). The glutaminase domain catalyzes amide nitrogen transfer from glutamine to the appropriate substrate. In ...
    cd05008
    Location:363 → 488
    SIS_GlmS_GlmD_1; SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal ...
    cd05009
    Location:520 → 674
    SIS_GlmS_GlmD_2; SIS (Sugar ISomerase) domain repeat 2 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal ...
Nucleotide Protein
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