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SOAT1 sterol O-acyltransferase 1 [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102351870, updated on 26-Apr-2024

Summary

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Gene symbol
SOAT1
Gene description
sterol O-acyltransferase 1
See related
Ensembl:ENSLACG00000010964
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
human zebrafish all
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Genomic context

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See SOAT1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 6 NC_088144.1 (101416288..101485289)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819905.1 (551302..619005, complement)

Chromosome 6 - NC_088144.1Genomic Context describing neighboring genes Neighboring gene aspartyl-tRNA synthetase 2, mitochondrial Neighboring gene centromere protein L Neighboring gene kelch-like family member 20 Neighboring gene FH1/FH2 domain-containing protein 3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cholesterol O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cholesterol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty-acyl-CoA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol efflux IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sterol O-acyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088144.1 Reference fLatCha1.pri

    Range
    101416288..101485289
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006003123.3 → XP_006003185.2  sterol O-acyltransferase 1

    UniProtKB/TrEMBL
    H3AS23
    Related
    ENSLACP00000012444.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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