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INPP4B inositol polyphosphate-4-phosphatase type II B [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102348021, updated on 30-Apr-2024

Summary

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Gene symbol
INPP4B
Gene description
inositol polyphosphate-4-phosphatase type II B
See related
Ensembl:ENSLACG00000001056
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
human zebrafish all
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Genomic context

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See INPP4B in Genome Data Viewer
Location:
chromosome: 1
Exon count:
32
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 1 NC_088139.1 (286356322..287155873, complement)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005821195.1 (9278..252023)

Chromosome 1 - NC_088139.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135360551 Neighboring gene uncharacterized LOC135358247 Neighboring gene 5S ribosomal RNA Neighboring gene uncharacterized LOC102355239 Neighboring gene ubiquitin specific peptidase 38

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inositol polyphosphate 4-phosphatase type II; type II inositol 3,4-bisphosphate 4-phosphatase
Names
inositol polyphosphate-4-phosphatase, type II, 105kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088139.1 Reference fLatCha1.pri

    Range
    286356322..287155873 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064561434.1 → XP_064417504.1  inositol polyphosphate 4-phosphatase type II isoform X4

  2. XM_064561429.1 → XP_064417499.1  type II inositol 3,4-bisphosphate 4-phosphatase isoform X3

  3. XM_064561408.1 → XP_064417478.1  inositol polyphosphate 4-phosphatase type II isoform X1

  4. XM_064561404.1 → XP_064417474.1  inositol polyphosphate 4-phosphatase type II isoform X1

  5. XM_064561390.1 → XP_064417460.1  inositol polyphosphate 4-phosphatase type II isoform X1

  6. XM_064561413.1 → XP_064417483.1  inositol polyphosphate 4-phosphatase type II isoform X1

  7. XM_064561399.1 → XP_064417469.1  inositol polyphosphate 4-phosphatase type II isoform X1

  8. XM_064561422.1 → XP_064417492.1  inositol polyphosphate 4-phosphatase type II isoform X2

  9. XM_064561441.1 → XP_064417511.1  type II inositol 3,4-bisphosphate 4-phosphatase isoform X5

Nucleotide Protein
Heading Accession and Version

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