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ATRN attractin [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102347805, updated on 30-Apr-2024

Summary

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Gene symbol
ATRN
Gene description
attractin
See related
Ensembl:ENSLACG00000015004
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
human zebrafish all
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Genomic context

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See ATRN in Genome Data Viewer
Location:
chromosome: 1
Exon count:
31
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 1 NC_088139.1 (406189227..406619355)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819396.1 (1146323..1479555)

Chromosome 1 - NC_088139.1Genomic Context describing neighboring genes Neighboring gene kyphoscoliosis peptidase Neighboring gene dynein axonemal assembly factor 9 Neighboring gene GDNF family receptor alpha 4a Neighboring gene uncharacterized LOC135359405

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
attractin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088139.1 Reference fLatCha1.pri

    Range
    406189227..406619355
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064564810.1 → XP_064420880.1  attractin isoform X1

  2. XM_064564812.1 → XP_064420882.1  attractin isoform X2

  3. XM_064564813.1 → XP_064420883.1  attractin isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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