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ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102347188, updated on 2-May-2024

Summary

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Gene symbol
ST3GAL2
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 2
See related
Ensembl:ENSLACG00000007075
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
human zebrafish all
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Genomic context

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See ST3GAL2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 5 NC_088143.1 (21934030..22023669, complement)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819833.1 (252692..494490, complement)

Chromosome 5 - NC_088143.1Genomic Context describing neighboring genes Neighboring gene exosome component 6 Neighboring gene uncharacterized LOC135357104 Neighboring gene alanyl-tRNA synthetase 1 Neighboring gene uncharacterized LOC135357105 Neighboring gene fucose kinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside (CMP) alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process via lactosylceramide IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sialylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2
Names
alpha2,3-sialyltransferase
NP_001303812.1
XP_006002661.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001316883.1 → NP_001303812.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2

    Status: PROVISIONAL

    Source sequence(s)
    HG531979
    UniProtKB/TrEMBL
    H3AEC2
    Conserved Domains (1) summary
    pfam00777
    Location:94 → 347
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088143.1 Reference fLatCha1.pri

    Range
    21934030..22023669 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006002599.3 → XP_006002661.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2 isoform X1

    See identical proteins and their annotated locations for XP_006002661.1

    UniProtKB/TrEMBL
    H3AEC2
    Related
    ENSLACP00000007993.2
    Conserved Domains (1) summary
    pfam00777
    Location:94 → 347
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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