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LOC102345205 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102345205, updated on 26-Apr-2024

Summary

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Gene symbol
LOC102345205
Gene description
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B
See related
Ensembl:ENSLACG00000009941
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Also known as
MGAT5B
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Genomic context

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See LOC102345205 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 18 NC_088156.1 (21610425..21798750)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819166.1 (457610..653009, complement)

Chromosome 18 - NC_088156.1Genomic Context describing neighboring genes Neighboring gene serine/arginine-rich splicing factor 2 Neighboring gene major facilitator superfamily domain containing 11 Neighboring gene uncharacterized LOC102367568 Neighboring gene small Cajal body-specific RNA 16 Neighboring gene SEC14-like protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B
Names
mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088156.1 Reference fLatCha1.pri

    Range
    21610425..21798750
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005993193.3 → XP_005993255.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B

    UniProtKB/TrEMBL
    H3ANT0
    Related
    ENSLACP00000011301.1
    Conserved Domains (1) summary
    pfam15024
    Location:181 → 781
    Glyco_transf_18; Glycosyltransferase family 18
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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