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CHML CHM like Rab escort protein [ Bos mutus (wild yak) ]

Gene ID: 102287533, updated on 10-Mar-2024

Summary

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Gene symbol
CHML
Gene description
CHM like Rab escort protein
Locus tag
M91_16305
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos mutus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See CHML in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current BosGru_v2.0 (GCF_000298355.1) Unplaced Scaffold NW_005393848.1 (1320397..1322582, complement)

NW_005393848.1Genomic Context describing neighboring genes Neighboring gene fumarate hydratase Neighboring gene kynurenine 3-monooxygenase Neighboring gene WD repeat domain 64 Neighboring gene protein-L-isoaspartate(D-aspartate) O-methyltransferase pseudogene Neighboring gene exonuclease 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005393848.1 Unplaced Scaffold Reference BosGru_v2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The yak genome and adaptation to life at high altitude. Qiu Q, et al. Nat Genet, 2012 Jul 1. PMID 22751099
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP-dissociation inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein geranylgeranylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in small GTPase-mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Rab-protein geranylgeranyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rab proteins geranylgeranyltransferase component A 2
Names
CHM like Rab escort protein 2
Rab proteins geranylgeranyltransferase component A 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos mutus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BosGru_v2.0 Primary Assembly

Genomic

  1. NW_005393848.1 Reference BosGru_v2.0 Primary Assembly

    Range
    1320397..1322582 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005897201.2 → XP_005897263.1  rab proteins geranylgeranyltransferase component A 2

    See identical proteins and their annotated locations for XP_005897263.1

    UniProtKB/TrEMBL
    A0A6B0R060, L8IJP9
    Conserved Domains (1) summary
    cl21454
    Location:6 → 541
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
Heading Accession and Version

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