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LOC102284430 alkylated DNA repair protein alkB homolog 8 [ Bos mutus (wild yak) ]

Gene ID: 102284430, updated on 2-Nov-2023

Summary

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Gene symbol
LOC102284430
Gene description
alkylated DNA repair protein alkB homolog 8
Locus tag
M91_19109
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos mutus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC102284430 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current BosGru_v2.0 (GCF_000298355.1) Unplaced Scaffold NW_005394220.1 (2589..88921, complement)

NW_005394220.1Genomic Context describing neighboring genes Neighboring gene ELMO domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005394220.1 Unplaced Scaffold Reference BosGru_v2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 2-oxoglutarate-dependent dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables demethylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in oxidative demethylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkylated DNA repair protein alkB homolog 8
Names
Alkylated DNA repair protein alkB-like protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos mutus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BosGru_v2.0 Primary Assembly

Genomic

  1. NW_005394220.1 Reference BosGru_v2.0 Primary Assembly

    Range
    2589..88921 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005900484.1 → XP_005900546.1  alkylated DNA repair protein alkB homolog 8

    UniProtKB/TrEMBL
    L8I9U1
    Conserved Domains (3) summary
    pfam09004
    Location:8 → 44
    DUF1891; Domain of unknown function (DUF1891)
    cd12431
    Location:49 → 129
    RRM_ALKBH8; RNA recognition motif in alkylated DNA repair protein alkB homolog 8 (ALKBH8) and similar proteins
    cl21496
    Location:159 → 308
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
Nucleotide Protein
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