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CLEC5A C-type lectin domain containing 5A [ Bos mutus (wild yak) ]

Gene ID: 102273636, updated on 10-Mar-2024

Summary

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Gene symbol
CLEC5A
Gene description
C-type lectin domain containing 5A
Locus tag
M91_13127
See related
Ensembl:ENSBMUG00000013241
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos mutus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See CLEC5A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current BosGru_v2.0 (GCF_000298355.1) Unplaced Scaffold NW_005394292.1 (16589..27532)

NW_005394292.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 9A4-like Neighboring gene olfactory receptor 9A4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005394292.1 Unplaced Scaffold Reference BosGru_v2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The yak genome and adaptation to life at high altitude. Qiu Q, et al. Nat Genet, 2012 Jul 1. PMID 22751099
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables virus receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 5 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos mutus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BosGru_v2.0 Primary Assembly

Genomic

  1. NW_005394292.1 Reference BosGru_v2.0 Primary Assembly

    Range
    16589..27532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005901063.1 → XP_005901125.1  C-type lectin domain family 5 member A isoform X1

    See identical proteins and their annotated locations for XP_005901125.1

    UniProtKB/TrEMBL
    L8IBF8
    Related
    ENSBMUP00000017520.1, ENSBMUT00000020264.1
    Conserved Domains (1) summary
    cd03593
    Location:68 → 182
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  2. XM_014479896.1 → XP_014335382.1  C-type lectin domain family 5 member A isoform X2

    Conserved Domains (1) summary
    cd03593
    Location:48 → 162
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
Nucleotide Protein
Heading Accession and Version

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