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TKT transketolase [ Bos mutus (wild yak) ]

Gene ID: 102273236, updated on 10-Mar-2024

Summary

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Gene symbol
TKT
Gene description
transketolase
Locus tag
M91_14521
See related
Ensembl:ENSBMUG00000000231
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos mutus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See TKT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current BosGru_v2.0 (GCF_000298355.1) Unplaced Scaffold NW_005393768.1 (838597..862273)

NW_005393768.1Genomic Context describing neighboring genes Neighboring gene microtubule-associated proteins 1A/1B light chain 3B Neighboring gene decapping mRNA 1A Neighboring gene protein slowmo homolog 2 pseudogene Neighboring gene protein kinase C delta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005393768.1 Unplaced Scaffold Reference BosGru_v2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transketolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pentose-phosphate shunt, non-oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribose phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transketolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos mutus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BosGru_v2.0 Primary Assembly

Genomic

  1. NW_005393768.1 Reference BosGru_v2.0 Primary Assembly

    Range
    838597..862273
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005896475.2 → XP_005896537.1  transketolase isoform X1

    UniProtKB/TrEMBL
    A0A6B0QZV1, L8IK36
    Related
    ENSBMUP00000000222.1, ENSBMUT00000000287.1
    Conserved Domains (4) summary
    cd07033
    Location:319 → 474
    TPP_PYR_DXS_TK_like; Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins
    PRK05899
    Location:8 → 620
    PRK05899; transketolase; Reviewed
    cd02012
    Location:20 → 271
    TPP_TK; Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates. In heterotrophic organisms, TK provides a link between glycolysis and the ...
    pfam02780
    Location:490 → 612
    Transketolase_C; Transketolase, C-terminal domain

  2. XM_005896477.2 → XP_005896539.2  transketolase isoform X3

    UniProtKB/TrEMBL
    L8IK36
    Conserved Domains (4) summary
    cd07033
    Location:275 → 430
    TPP_PYR_DXS_TK_like; Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins
    PRK05899
    Location:8 → 576
    PRK05899; transketolase; Reviewed
    cd02012
    Location:20 → 227
    TPP_TK; Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates. In heterotrophic organisms, TK provides a link between glycolysis and the ...
    pfam02780
    Location:446 → 568
    Transketolase_C; Transketolase, C-terminal domain

  3. XM_005896476.2 → XP_005896538.2  transketolase isoform X2

    UniProtKB/TrEMBL
    L8IK36
    Conserved Domains (4) summary
    cd07033
    Location:281 → 436
    TPP_PYR_DXS_TK_like; Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins
    PRK05899
    Location:8 → 582
    PRK05899; transketolase; Reviewed
    cd02012
    Location:20 → 233
    TPP_TK; Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates. In heterotrophic organisms, TK provides a link between glycolysis and the ...
    pfam02780
    Location:452 → 574
    Transketolase_C; Transketolase, C-terminal domain
Nucleotide Protein
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