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BPIFB1 BPI fold containing family B member 1 [ Bos mutus (wild yak) ]

Gene ID: 102268704, updated on 10-Mar-2024

Summary

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Gene symbol
BPIFB1
Gene description
BPI fold containing family B member 1
Locus tag
M91_05151
See related
Ensembl:ENSBMUG00000024706
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos mutus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See BPIFB1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current BosGru_v2.0 (GCF_000298355.1) Unplaced Scaffold NW_005393818.1 (1449155..1472671)

NW_005393818.1Genomic Context describing neighboring genes Neighboring gene BPI fold containing family A member 3 Neighboring gene BPI fold containing family A member 1 Neighboring gene uncharacterized LOC102268988 Neighboring gene vomeromodulin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005393818.1 Unplaced Scaffold Reference BosGru_v2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The yak genome and adaptation to life at high altitude. Qiu Q, et al. Nat Genet, 2012 Jul 1. PMID 22751099
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BPI fold-containing family B member 1
Names
Long palate, lung and nasal epithelium carcinoma-associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos mutus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BosGru_v2.0 Primary Assembly

Genomic

  1. NW_005393818.1 Reference BosGru_v2.0 Primary Assembly

    Range
    1449155..1472671
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005896920.2 → XP_005896982.1  BPI fold-containing family B member 1

    See identical proteins and their annotated locations for XP_005896982.1

    UniProtKB/TrEMBL
    L8IHA7
    Related
    ENSBMUP00000033070.1, ENSBMUT00000038088.1
    Conserved Domains (2) summary
    cd00025
    Location:26 → 259
    BPI1; BPI/LBP/CETP N-terminal domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) N-terminal domain; binds to and neutralizes lipopolysaccharides from the outer ...
    cd00026
    Location:278 → 473
    BPI2; BPI/LBP/CETP C-terminal domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) C-terminal domain; binds to and neutralizes lipopolysaccharides from the outer ...
Nucleotide Protein
Heading Accession and Version

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