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BEND6 BEN domain containing 6 [ Myotis brandtii (Brandt's bat) ]

Gene ID: 102256168, updated on 30-Mar-2024

Summary

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Gene symbol
BEND6
Gene description
BEN domain containing 6
Locus tag
D623_10026674
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis brandtii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See BEND6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current ASM41265v1 (GCF_000412655.1) Unplaced Scaffold NW_005356519.1 (2871553..2925662)

NW_005356519.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106725605 Neighboring gene uncharacterized LOC106725604 Neighboring gene dystonin Neighboring gene nucleophosmin-like Neighboring gene zinc finger protein 451 Neighboring gene high mobility group protein B1 pseudogene Neighboring gene BAG cochaperone 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005356519.1 Unplaced Scaffold Reference ASM41265v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome analysis reveals insights into physiology and longevity of the Brandt's bat Myotis brandtii. Seim I, et al. Nat Commun, 2013. PMID 23962925, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BEN domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis brandtii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41265v1

Genomic

  1. NW_005356519.1 Reference ASM41265v1

    Range
    2871553..2925662
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005863307.2 → XP_005863369.1  BEN domain-containing protein 6 isoform X1

    See identical proteins and their annotated locations for XP_005863369.1

    UniProtKB/TrEMBL
    S7MNR6
    Conserved Domains (1) summary
    smart01025
    Location:192 → 273
    BEN; The BEN domain is found in diverse animal proteins

  2. XM_005863305.2 → XP_005863367.1  BEN domain-containing protein 6 isoform X1

    See identical proteins and their annotated locations for XP_005863367.1

    UniProtKB/TrEMBL
    S7MNR6
    Conserved Domains (1) summary
    smart01025
    Location:192 → 273
    BEN; The BEN domain is found in diverse animal proteins

  3. XM_014537312.1 → XP_014392798.1  BEN domain-containing protein 6 isoform X2

    Conserved Domains (1) summary
    pfam10523
    Location:193 → 223
    BEN; BEN domain

  4. XM_005863306.2 → XP_005863368.1  BEN domain-containing protein 6 isoform X1

    See identical proteins and their annotated locations for XP_005863368.1

    UniProtKB/TrEMBL
    S7MNR6
    Conserved Domains (1) summary
    smart01025
    Location:192 → 273
    BEN; The BEN domain is found in diverse animal proteins
Nucleotide Protein
Heading Accession and Version

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