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CCNT2 cyclin T2 [ Myotis brandtii (Brandt's bat) ]

Gene ID: 102248639, updated on 30-Mar-2024

Summary

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Gene symbol
CCNT2
Gene description
cyclin T2
Locus tag
D623_10010638
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis brandtii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Also known as
Cyclin-T2
Orthologs
human mouse all
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Genomic context

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See CCNT2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current ASM41265v1 (GCF_000412655.1) Unplaced Scaffold NW_005360594.1 (937810..976136)

NW_005360594.1Genomic Context describing neighboring genes Neighboring gene heat shock protein HSP 90-alpha pseudogene Neighboring gene aminocarboxymuconate semialdehyde decarboxylase Neighboring gene mitogen-activated protein kinase kinase kinase 19 Neighboring gene RAB3 GTPase activating protein catalytic subunit 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005360594.1 Unplaced Scaffold Reference ASM41265v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome analysis reveals insights into physiology and longevity of the Brandt's bat Myotis brandtii. Seim I, et al. Nat Commun, 2013. PMID 23962925, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cyclin-dependent protein serine/threonine kinase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription, elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cyclin/CDK positive transcription elongation factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclin-T2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis brandtii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41265v1

Genomic

  1. NW_005360594.1 Reference ASM41265v1

    Range
    937810..976136
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005868862.2 → XP_005868924.1  cyclin-T2 isoform X1

    See identical proteins and their annotated locations for XP_005868924.1

    UniProtKB/TrEMBL
    S7MXY2
    Conserved Domains (2) summary
    cd20596
    Location:8 → 146
    CYCLIN_CCNT2_rpt1; first cyclin box found in cyclin-T2 (CCNT2)
    cd20598
    Location:150 → 263
    CYCLIN_CCNT2_rpt2; second cyclin box found in cyclin-T2 (CCNT2)

  2. XM_005868859.2 → XP_005868921.1  cyclin-T2 isoform X4

    Conserved Domains (2) summary
    cd20596
    Location:8 → 146
    CYCLIN_CCNT2_rpt1; first cyclin box found in cyclin-T2 (CCNT2)
    cd20598
    Location:150 → 263
    CYCLIN_CCNT2_rpt2; second cyclin box found in cyclin-T2 (CCNT2)

  3. XM_005868864.2 → XP_005868926.1  cyclin-T2 isoform X2

    Conserved Domains (1) summary
    cl40454
    Location:8 → 143
    CYCLIN_SF; Cyclin box fold superfamily

  4. XM_014541770.1 → XP_014397256.1  cyclin-T2 isoform X3

    Conserved Domains (1) summary
    cl28538
    Location:33 → 169
    CCL1; Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]

  5. XM_014541772.1 → XP_014397258.1  cyclin-T2 isoform X5

    Conserved Domains (1) summary
    cl00050
    Location:6 → 72
    CYCLIN; Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control. Present in cyclins, TFIIB and Retinoblastoma (RB).The cyclins consist of 8 classes of cell cycle regulators that regulate cyclin dependent kinases (CDKs). TFIIB ...

  6. XM_014541771.1 → XP_014397257.1  cyclin-T2 isoform X3

    Conserved Domains (1) summary
    cl28538
    Location:33 → 169
    CCL1; Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]

  7. XM_014541773.1 → XP_014397259.1  cyclin-T2 isoform X6

    Conserved Domains (2) summary
    COG5333
    Location:1 → 78
    CCL1; Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
    COG5422
    Location:158 → 289
    ROM1; RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms]

  8. XM_014541774.1 → XP_014397260.1  cyclin-T2 isoform X6

    Conserved Domains (2) summary
    COG5333
    Location:1 → 78
    CCL1; Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
    COG5422
    Location:158 → 289
    ROM1; RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms]

  9. XM_005868861.2 → XP_005868923.2  cyclin-T2 isoform X3

    Conserved Domains (1) summary
    cl28538
    Location:33 → 169
    CCL1; Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]

  10. XM_005868865.2 → XP_005868927.1  cyclin-T2 isoform X7

    Conserved Domains (1) summary
    cl40454
    Location:18 → 119
    CYCLIN_SF; Cyclin box fold superfamily

  11. XM_014541776.1 → XP_014397262.1  cyclin-T2 isoform X7

    Conserved Domains (1) summary
    cl40454
    Location:18 → 119
    CYCLIN_SF; Cyclin box fold superfamily

  12. XM_014541775.1 → XP_014397261.1  cyclin-T2 isoform X7

    Conserved Domains (1) summary
    cl40454
    Location:18 → 119
    CYCLIN_SF; Cyclin box fold superfamily

RNA

  1. XR_001362602.1 RNA Sequence

  2. XR_313739.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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