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LOC102237286 myosin heavy chain, fast skeletal muscle-like [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102237286, updated on 22-Oct-2023

Summary

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Gene symbol
LOC102237286
Gene description
myosin heavy chain, fast skeletal muscle-like
See related
Ensembl:ENSXMAG00000021310
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
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Genomic context

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See LOC102237286 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
41
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 20 NC_036462.1 (17604933..17616350)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372364.1 (926752..929734, complement)

Chromosome 20 - NC_036462.1Genomic Context describing neighboring genes Neighboring gene myosin heavy chain, fast skeletal muscle-like Neighboring gene myosin heavy chain, fast skeletal muscle-like Neighboring gene uncharacterized LOC111612351 Neighboring gene voltage-dependent calcium channel subunit alpha-2/delta-2-like Neighboring gene aminoacylase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytoskeletal motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of myosin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myosin heavy chain, fast skeletal muscle-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036462.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    17604933..17616350
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023353522.1 → XP_023209290.1  myosin heavy chain, fast skeletal muscle-like

    UniProtKB/TrEMBL
    A0A3B5QT55
    Conserved Domains (3) summary
    cd01377
    Location:99 → 767
    MYSc_class_II; class II myosins, motor domain
    pfam02736
    Location:34 → 72
    Myosin_N; Myosin N-terminal SH3-like domain
    cl25732
    Location:847 → 1924
    SMC_N; RecF/RecN/SMC N terminal domain

  2. XM_023353521.1 → XP_023209289.1  myosin heavy chain, fast skeletal muscle-like

    UniProtKB/TrEMBL
    A0A3B5QT55
    Related
    ENSXMAP00000033435.1, ENSXMAT00000023902.1
    Conserved Domains (3) summary
    cd01377
    Location:99 → 767
    MYSc_class_II; class II myosins, motor domain
    pfam02736
    Location:34 → 72
    Myosin_N; Myosin N-terminal SH3-like domain
    cl25732
    Location:847 → 1924
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein Strain
Heading Accession and Version

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