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st3gal3b ST3 beta-galactoside alpha-2,3-sialyltransferase 3b [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102237009, updated on 10-Mar-2024

Summary

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Gene symbol
st3gal3b
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 3b
See related
Ensembl:ENSXMAG00000029949
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Also known as
st3gal3
Orthologs
zebrafish all
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Genomic context

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See st3gal3b in Genome Data Viewer
Location:
chromosome: 6
Exon count:
14
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 6 NC_036448.1 (2440376..2509254)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372255.1 (82942..147645)

Chromosome 6 - NC_036448.1Genomic Context describing neighboring genes Neighboring gene abhydrolase domain containing 8a Neighboring gene lysine (K)-specific demethylase 4A, genome duplicate b Neighboring gene uncharacterized LOC111608808 Neighboring gene prostaglandin E2 receptor EP4 subtype-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase
Names
ST3 beta-galactoside alpha-2,3-sialyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036448.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    2440376..2509254
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023335142.1 → XP_023190910.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A3B5QSY3, A0A3B5QV89
    Related
    ENSXMAP00000040827.1, ENSXMAT00000029716.1
    Conserved Domains (1) summary
    pfam00777
    Location:123 → 388
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_023335141.1 → XP_023190909.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A3B5QSY3, A0A3B5QV89
    Related
    ENSXMAP00000034444.1, ENSXMAT00000023665.1
    Conserved Domains (1) summary
    pfam00777
    Location:123 → 388
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_014469998.2 → XP_014325484.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A3B5PXC1
    Related
    ENSXMAP00000022659.1, ENSXMAT00000028649.1
    Conserved Domains (1) summary
    pfam00777
    Location:102 → 367
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_023335143.1 → XP_023190911.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase isoform X3

    UniProtKB/TrEMBL
    A0A3B5QHV6
    Related
    ENSXMAP00000030493.1, ENSXMAT00000037260.1
    Conserved Domains (1) summary
    pfam00777
    Location:88 → 353
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein Strain
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