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eif4g2a eukaryotic translation initiation factor 4, gamma 2a [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102235767, updated on 10-Mar-2024

Summary

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Gene symbol
eif4g2a
Gene description
eukaryotic translation initiation factor 4, gamma 2a
See related
Ensembl:ENSXMAG00000009265
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Also known as
eif4g2
Annotation information
Annotation category: partial on reference assembly
Orthologs
zebrafish all
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Genomic context

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See eif4g2a in Genome Data Viewer
Location:
chromosome: 4
Exon count:
20
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 4 NC_036446.1 (17949720..17955169)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372603.1 (18184..23588)

Chromosome 4 - NC_036446.1Genomic Context describing neighboring genes Neighboring gene UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18b Neighboring gene uncharacterized LOC111608337 Neighboring gene CTR9 homolog, Paf1/RNA polymerase II complex component Neighboring gene murine retrovirus integration site 1 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of eukaryotic translation initiation factor 4F complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 4 gamma 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036446.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    17949720..17955169
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005812109.3 → XP_005812166.3  eukaryotic translation initiation factor 4 gamma 2

    UniProtKB/TrEMBL
    M4A4A2
    Related
    ENSXMAP00000009296.2, ENSXMAT00000009310.2
    Conserved Domains (3) summary
    cd11559
    Location:716 → 863
    W2_eIF4G1_like; C-terminal W2 domain of eukaryotic translation initiation factor 4 gamma 1 and similar proteins
    pfam02854
    Location:78 → 308
    MIF4G; MIF4G domain
    cl02653
    Location:534 → 645
    MA3; MA3 domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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