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kirrel3l kirre like nephrin family adhesion molecule 3, like [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102235126, updated on 10-Mar-2024

Summary

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Gene symbol
kirrel3l
Gene description
kirre like nephrin family adhesion molecule 3, like
See related
Ensembl:ENSXMAG00000010464
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Also known as
kirrel2
Orthologs
human zebrafish all
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Genomic context

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See kirrel3l in Genome Data Viewer
Location:
chromosome: 3
Exon count:
15
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 3 NC_036445.1 (14213471..14257976, complement)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372205.1 (1005953..1051901)

Chromosome 3 - NC_036445.1Genomic Context describing neighboring genes Neighboring gene amyloid beta (A4) precursor-like protein 1 Neighboring gene ST14 transmembrane serine protease matriptase Neighboring gene NPHS1 adhesion molecule, nephrin Neighboring gene FXYD domain containing ion transport regulator 5 Neighboring gene Fc fragment of IgG binding protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 2
Names
kin of IRRE like 2
kirre like nephrin family adhesion molecule 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036445.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    14213471..14257976 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023330213.1 → XP_023185981.1  kin of IRRE-like protein 2 isoform X1

    UniProtKB/TrEMBL
    M4A7R6
    Conserved Domains (5) summary
    cd05759
    Location:139 → 220
    Ig2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2)
    smart00409
    Location:40 → 117
    IG; Immunoglobulin
    pfam13895
    Location:227 → 306
    Ig_2; Immunoglobulin domain
    pfam07679
    Location:309 → 390
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:392 → 489
    Ig; Immunoglobulin domain

  2. XM_023330214.1 → XP_023185982.1  kin of IRRE-like protein 2 isoform X2

    UniProtKB/TrEMBL
    M4A7R6
    Conserved Domains (5) summary
    cd05759
    Location:139 → 220
    Ig2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2)
    smart00409
    Location:40 → 117
    IG; Immunoglobulin
    pfam13895
    Location:227 → 306
    Ig_2; Immunoglobulin domain
    pfam07679
    Location:309 → 390
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:392 → 489
    Ig; Immunoglobulin domain

  3. XM_005798421.2 → XP_005798478.1  kin of IRRE-like protein 2 isoform X3

    UniProtKB/TrEMBL
    M4A7R6
    Conserved Domains (5) summary
    cd05759
    Location:139 → 220
    Ig2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2)
    smart00409
    Location:40 → 117
    IG; Immunoglobulin
    pfam13895
    Location:227 → 306
    Ig_2; Immunoglobulin domain
    pfam07679
    Location:309 → 390
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:392 → 489
    Ig; Immunoglobulin domain

  4. XM_023330215.1 → XP_023185983.1  kin of IRRE-like protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A3B5QUK9, M4A7R6
    Related
    ENSXMAP00000033970.1, ENSXMAT00000031805.1
    Conserved Domains (5) summary
    cd05759
    Location:139 → 220
    Ig2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2)
    smart00409
    Location:40 → 117
    IG; Immunoglobulin
    pfam13895
    Location:227 → 306
    Ig_2; Immunoglobulin domain
    pfam07679
    Location:309 → 390
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:392 → 489
    Ig; Immunoglobulin domain
Nucleotide Protein Strain
Heading Accession and Version

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