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ramac RNA guanine-7 methyltransferase activating subunit [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102233716, updated on 25-Jan-2024

Summary

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Gene symbol
ramac
Gene description
RNA guanine-7 methyltransferase activating subunit
See related
Ensembl:ENSXMAG00000015208
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Also known as
rammet; fam103a1
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Genomic context

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See ramac in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 4 NC_036446.1 (23917886..23920093, complement)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005373616.1 (591..2484)

Chromosome 4 - NC_036446.1Genomic Context describing neighboring genes Neighboring gene transmembrane 6 superfamily member 1 Neighboring gene BTB domain containing 1 Neighboring gene homer scaffold protein 2 Neighboring gene WASP homolog associated with actin, golgi membranes and microtubules

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA 5'-cap (guanine-N7)-methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNMT-activating mini protein
Names
RNMT activating mRNA cap methyltransferase subunit
family with sequence similarity 103 member A1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036446.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    23917886..23920093 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005815617.3 → XP_005815674.1  RNMT-activating mini protein

    UniProtKB/TrEMBL
    M4AL81
    Related
    ENSXMAP00000015225.2, ENSXMAT00000015246.2
    Conserved Domains (1) summary
    pfam15320
    Location:10 → 88
    RAM; mRNA cap methylation, RNMT-activating mini protein

  2. XM_023332551.1 → XP_023188319.1  RNMT-activating mini protein

    UniProtKB/TrEMBL
    M4AL81
    Conserved Domains (1) summary
    pfam15320
    Location:10 → 88
    RAM; mRNA cap methylation, RNMT-activating mini protein
Nucleotide Protein Strain
Heading Accession and Version

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