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si:dkey-199f5.8 beta-1,4-galactosyltransferase 3-like [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102233588, updated on 10-Mar-2024

Summary

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Gene symbol
si:dkey-199f5.8
Gene description
beta-1,4-galactosyltransferase 3-like
See related
Ensembl:ENSXMAG00000013241
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
zebrafish all
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Genomic context

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See si:dkey-199f5.8 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 3 NC_036445.1 (12990080..13005241)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372246.1 (122774..128538, complement)

Chromosome 3 - NC_036445.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111608022 Neighboring gene proteasome 26S subunit, ATPase 4 Neighboring gene CD82 antigen-like Neighboring gene melanocortin receptor 4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036445.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    12990080..13005241
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005801833.3 → XP_005801890.2  beta-1,4-galactosyltransferase 3-like

    UniProtKB/TrEMBL
    M4AFM6
    Related
    ENSXMAP00000013270.1, ENSXMAT00000013286.2
    Conserved Domains (1) summary
    cd00899
    Location:128 → 346
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein Strain
Heading Accession and Version

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