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kptn kaptin (actin binding protein) [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102232734, updated on 10-Mar-2024

Summary

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Gene symbol
kptn
Gene description
kaptin (actin binding protein)
See related
Ensembl:ENSXMAG00000017878
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
human zebrafish all
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Genomic context

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See kptn in Genome Data Viewer
Location:
chromosome: 11
Exon count:
12
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 11 NC_036453.1 (28650750..28657831, complement)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372359.1 (898603..905386)

Chromosome 11 - NC_036453.1Genomic Context describing neighboring genes Neighboring gene calpain, small subunit 1 a Neighboring gene uncharacterized LOC102232996 Neighboring gene microtubule associated tumor suppressor candidate 2a Neighboring gene stomatin (EPB72)-like 3b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to amino acid starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of KICSTOR complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
KICSTOR complex protein kaptin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036453.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    28650750..28657831 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014471781.2 → XP_014327267.2  KICSTOR complex protein kaptin

    UniProtKB/TrEMBL
    M4ATW8
    Related
    ENSXMAP00000017913.2, ENSXMAT00000017939.2
    Conserved Domains (1) summary
    pfam13517
    Location:315 → 379
    VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
Nucleotide Protein Strain
Heading Accession and Version

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