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dnal4 dynein axonemal light chain 4 [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102231362, updated on 22-Oct-2023

Summary

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Gene symbol
dnal4
Gene description
dynein axonemal light chain 4
See related
Ensembl:ENSXMAG00000026714
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
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Genomic context

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See dnal4 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 5 NC_036447.1 (26444086..26447523)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372522.1 (206009..208735)

Chromosome 5 - NC_036447.1Genomic Context describing neighboring genes Neighboring gene chromobox homolog 6a Neighboring gene neuronal pentraxin receptor b Neighboring gene extracellular serine/threonine protein kinase FAM20C-like Neighboring gene dynein heavy chain domain-containing protein 1-like Neighboring gene BAR/IMD domain containing adaptor protein 2 like 2b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dynein intermediate chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables dynein light intermediate chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule-based process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of dynein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dynein light chain 4, axonemal

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036447.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    26444086..26447523
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005810944.2 → XP_005811001.1  dynein light chain 4, axonemal

    See identical proteins and their annotated locations for XP_005811001.1

    UniProtKB/TrEMBL
    A0A3B5QHX7
    Related
    ENSXMAP00000031159.1, ENSXMAT00000041695.1
    Conserved Domains (1) summary
    cd21453
    Location:22 → 104
    DLC-like_DNAL4; dynein light chain (DLC)-like domain found in axonemal dynein light chain 4 (DNAL4) and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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