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ercc6l2 excision repair cross-complementation group 6-like 2 [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102229301, updated on 10-Mar-2024

Summary

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Gene symbol
ercc6l2
Gene description
excision repair cross-complementation group 6-like 2
See related
Ensembl:ENSXMAG00000023695
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
human zebrafish all
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Genomic context

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See ercc6l2 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
20
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 12 NC_036454.1 (13315375..13331148)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372180.1 (2850570..2863644)

Chromosome 12 - NC_036454.1Genomic Context describing neighboring genes Neighboring gene FA complementation group C Neighboring gene patched 1 Neighboring gene hydroxysteroid (17-beta) dehydrogenase 3 Neighboring gene importin 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA excision repair protein ERCC-6-like 2
Names
ERCC excision repair 6 like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036454.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    13315375..13331148
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023344118.1 → XP_023199886.1  DNA excision repair protein ERCC-6-like 2

    UniProtKB/TrEMBL
    A0A3B5QPJ9
    Related
    ENSXMAP00000033349.1, ENSXMAT00000024481.1
    Conserved Domains (1) summary
    COG0553
    Location:112 → 648
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
Nucleotide Protein Strain
Heading Accession and Version

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