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LOC102228262 carbohydrate sulfotransferase 6-like [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102228262, updated on 22-Oct-2023

Summary

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Gene symbol
LOC102228262
Gene description
carbohydrate sulfotransferase 6-like
See related
Ensembl:ENSXMAG00000016076
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
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Genomic context

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See LOC102228262 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 2 NC_036444.1 (19846789..19858772)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372187.1 (2052136..2053335)

Chromosome 2 - NC_036444.1Genomic Context describing neighboring genes Neighboring gene GABA(A) receptor-associated protein like 2 Neighboring gene transmembrane protein 231 Neighboring gene carbohydrate sulfotransferase 6-like Neighboring gene carbohydrate sulfotransferase 6-like Neighboring gene carbohydrate sulfotransferase 5-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfur compound metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036444.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    19846789..19858772
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023342603.1 → XP_023198371.1  carbohydrate sulfotransferase 6-like isoform X1

    UniProtKB/TrEMBL
    M4ANQ3
    Conserved Domains (1) summary
    pfam13469
    Location:47 → 299
    Sulfotransfer_3; Sulfotransferase family

  2. XM_005796377.2 → XP_005796434.2  carbohydrate sulfotransferase 6-like isoform X1

    UniProtKB/TrEMBL
    M4ANQ3
    Related
    ENSXMAP00000016098.2, ENSXMAT00000016122.2
    Conserved Domains (1) summary
    pfam13469
    Location:47 → 299
    Sulfotransfer_3; Sulfotransferase family

  3. XM_023342613.1 → XP_023198381.1  carbohydrate sulfotransferase 6-like isoform X2

    Conserved Domains (1) summary
    cl21551
    Location:47 → 215
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein Strain
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