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kif1b kinesin family member 1B [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102227622, updated on 10-Mar-2024

Summary

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Gene symbol
kif1b
Gene description
kinesin family member 1B
See related
Ensembl:ENSXMAG00000011378
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
human zebrafish all
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Genomic context

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See kif1b in Genome Data Viewer
Location:
chromosome: 1
Exon count:
51
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 1 NC_036443.1 (12655828..12713701, complement)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372396.1 (689376..747865, complement)

Chromosome 1 - NC_036443.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U3 Neighboring gene phosphogluconate dehydrogenase Neighboring gene ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) Neighboring gene retinol binding protein 7a, cellular

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule-based movement IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kinesin-like protein KIF1B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036443.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    12655828..12713701 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023340371.1 → XP_023196139.1  kinesin-like protein KIF1B isoform X4

    UniProtKB/TrEMBL
    M4AAK3
    Conserved Domains (7) summary
    cd00060
    Location:513 → 617
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01233
    Location:1696 → 1798
    PH_KIFIA_KIFIB; KIFIA and KIFIB protein pleckstrin homology (PH) domain
    cd01365
    Location:4 → 356
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam12423
    Location:836 → 884
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:1257 → 1404
    DUF3694; Kinesin protein
    pfam16183
    Location:353 → 536
    Kinesin_assoc; Kinesin-associated
    cl20817
    Location:620 → 694
    GBP_C; Guanylate-binding protein, C-terminal domain

  2. XM_023340393.1 → XP_023196161.1  kinesin-like protein KIF1B isoform X9

    UniProtKB/TrEMBL
    M4AAK3
    Conserved Domains (7) summary
    cd00060
    Location:519 → 623
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01233
    Location:1611 → 1713
    PH_KIFIA_KIFIB; KIFIA and KIFIB protein pleckstrin homology (PH) domain
    cd01365
    Location:4 → 362
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam12423
    Location:836 → 883
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:1172 → 1319
    DUF3694; Kinesin protein
    pfam16183
    Location:359 → 542
    Kinesin_assoc; Kinesin-associated
    cl20817
    Location:626 → 700
    GBP_C; Guanylate-binding protein, C-terminal domain

  3. XM_023340375.1 → XP_023196143.1  kinesin-like protein KIF1B isoform X5

    UniProtKB/TrEMBL
    M4AAK3
    Conserved Domains (7) summary
    cd00060
    Location:519 → 623
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01233
    Location:1695 → 1797
    PH_KIFIA_KIFIB; KIFIA and KIFIB protein pleckstrin homology (PH) domain
    cd01365
    Location:4 → 362
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam12423
    Location:836 → 884
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:1256 → 1403
    DUF3694; Kinesin protein
    pfam16183
    Location:359 → 542
    Kinesin_assoc; Kinesin-associated
    cl20817
    Location:626 → 700
    GBP_C; Guanylate-binding protein, C-terminal domain

  4. XM_023340362.1 → XP_023196130.1  kinesin-like protein KIF1B isoform X3

    UniProtKB/TrEMBL
    M4AAK3
    Conserved Domains (7) summary
    cd00060
    Location:519 → 623
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01233
    Location:1696 → 1798
    PH_KIFIA_KIFIB; KIFIA and KIFIB protein pleckstrin homology (PH) domain
    cd01365
    Location:4 → 362
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam12423
    Location:836 → 884
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:1257 → 1404
    DUF3694; Kinesin protein
    pfam16183
    Location:359 → 542
    Kinesin_assoc; Kinesin-associated
    cl20817
    Location:626 → 700
    GBP_C; Guanylate-binding protein, C-terminal domain

  5. XM_023340389.1 → XP_023196157.1  kinesin-like protein KIF1B isoform X8

    UniProtKB/TrEMBL
    M4AAK3
    Conserved Domains (7) summary
    cd00060
    Location:519 → 623
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01233
    Location:1617 → 1719
    PH_KIFIA_KIFIB; KIFIA and KIFIB protein pleckstrin homology (PH) domain
    cd01365
    Location:4 → 362
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam12423
    Location:842 → 889
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:1178 → 1325
    DUF3694; Kinesin protein
    pfam16183
    Location:359 → 542
    Kinesin_assoc; Kinesin-associated
    cl20817
    Location:626 → 700
    GBP_C; Guanylate-binding protein, C-terminal domain

  6. XM_023340355.1 → XP_023196123.1  kinesin-like protein KIF1B isoform X2

    UniProtKB/TrEMBL
    M4AAK3
    Conserved Domains (7) summary
    cd00060
    Location:519 → 623
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01233
    Location:1702 → 1804
    PH_KIFIA_KIFIB; KIFIA and KIFIB protein pleckstrin homology (PH) domain
    cd01365
    Location:4 → 362
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam12423
    Location:842 → 890
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:1263 → 1410
    DUF3694; Kinesin protein
    pfam16183
    Location:359 → 542
    Kinesin_assoc; Kinesin-associated
    cl20817
    Location:626 → 700
    GBP_C; Guanylate-binding protein, C-terminal domain

  7. XM_023340353.1 → XP_023196121.1  kinesin-like protein KIF1B isoform X1

    UniProtKB/TrEMBL
    M4AAK3
    Conserved Domains (7) summary
    cd00060
    Location:533 → 637
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01233
    Location:1709 → 1811
    PH_KIFIA_KIFIB; KIFIA and KIFIB protein pleckstrin homology (PH) domain
    cd01365
    Location:4 → 362
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam12423
    Location:850 → 898
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:1270 → 1417
    DUF3694; Kinesin protein
    pfam16183
    Location:359 → 556
    Kinesin_assoc; Kinesin-associated
    cl20817
    Location:640 → 714
    GBP_C; Guanylate-binding protein, C-terminal domain

  8. XM_023340385.1 → XP_023196153.1  kinesin-like protein KIF1B isoform X7

    UniProtKB/TrEMBL
    M4AAK3
    Related
    ENSXMAP00000011497.2, ENSXMAT00000011511.2
    Conserved Domains (7) summary
    cd00060
    Location:487 → 591
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01233
    Location:1663 → 1765
    PH_KIFIA_KIFIB; KIFIA and KIFIB protein pleckstrin homology (PH) domain
    cd01365
    Location:4 → 356
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam12423
    Location:804 → 852
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:1224 → 1371
    DUF3694; Kinesin protein
    pfam16183
    Location:353 → 510
    Kinesin_assoc; Kinesin-associated
    cl20817
    Location:594 → 668
    GBP_C; Guanylate-binding protein, C-terminal domain

  9. XM_023340378.1 → XP_023196146.1  kinesin-like protein KIF1B isoform X6

    UniProtKB/TrEMBL
    M4AAK3
    Conserved Domains (7) summary
    cd00060
    Location:493 → 597
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01233
    Location:1676 → 1778
    PH_KIFIA_KIFIB; KIFIA and KIFIB protein pleckstrin homology (PH) domain
    cd01365
    Location:4 → 362
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam12423
    Location:816 → 864
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:1237 → 1384
    DUF3694; Kinesin protein
    pfam16183
    Location:359 → 516
    Kinesin_assoc; Kinesin-associated
    cl20817
    Location:600 → 674
    GBP_C; Guanylate-binding protein, C-terminal domain

  10. XM_023340402.1 → XP_023196170.1  kinesin-like protein KIF1B isoform X10

    Conserved Domains (3) summary
    cd00060
    Location:487 → 591
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01365
    Location:4 → 356
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam16183
    Location:353 → 510
    Kinesin_assoc; Kinesin-associated
Nucleotide Protein Strain
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