U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

myo9b myosin IXB [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102227332, updated on 12-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
myo9b
Gene description
myosin IXB
See related
Ensembl:ENSXMAG00000018704
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Also known as
si:zfos-588f8.1
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See myo9b in Genome Data Viewer
Location:
chromosome: 9
Exon count:
44
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 9 NC_036451.1 (14657034..14726934, complement)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372228.1 (1851724..1881145, complement)

Chromosome 9 - NC_036451.1Genomic Context describing neighboring genes Neighboring gene insulin receptor b Neighboring gene unconventional SNARE in the ER 1 homolog (S. cerevisiae) Neighboring gene uncharacterized LOC111609665 Neighboring gene sphingosine-1-phosphate receptor 4

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microfilament motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of myosin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
unconventional myosin-IXb

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036451.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    14657034..14726934 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023339293.1 → XP_023195061.1  unconventional myosin-IXb

    UniProtKB/TrEMBL
    M4AWA0
    Related
    ENSXMAP00000018745.2, ENSXMAT00000018773.2
    Conserved Domains (5) summary
    smart00015
    Location:1040 → 1062
    IQ; Calmodulin-binding motif
    cd00029
    Location:1708 → 1756
    C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
    cd01385
    Location:175 → 983
    MYSc_Myo9; class IX myosin, motor domain
    cl02570
    Location:1773 → 1958
    RhoGAP; GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when bound to ...
    cl00155
    Location:28 → 126
    UBQ; Ubiquitin-like proteins
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.