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LOC102226730 xylosyltransferase 1 [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102226730, updated on 22-Oct-2023

Summary

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Gene symbol
LOC102226730
Gene description
xylosyltransferase 1
See related
Ensembl:ENSXMAG00000004881
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Also known as
xylt1
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Genomic context

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See LOC102226730 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
11
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 5 NC_036447.1 (20210927..20323866, complement)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372194.1 (2132885..2229193)

Chromosome 5 - NC_036447.1Genomic Context describing neighboring genes Neighboring gene notum pectinacetylesterase 2 Neighboring gene ribosomal protein S15a Neighboring gene nodal modulator Neighboring gene transmembrane channel like 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heparan sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xylosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036447.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    20210927..20323866 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023334238.1 → XP_023190006.1  xylosyltransferase 1

    UniProtKB/TrEMBL
    A0A3B5R270, M3ZRR0
    Related
    ENSXMAP00000004903.2, ENSXMAT00000004908.2
    Conserved Domains (2) summary
    pfam12529
    Location:602 → 784
    Xylo_C; Xylosyltransferase C terminal
    cl27418
    Location:317 → 569
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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