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LOC102226204 troponin I, fast skeletal muscle-like [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102226204, updated on 22-Oct-2023

Summary

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Gene symbol
LOC102226204
Gene description
troponin I, fast skeletal muscle-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
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Genomic context

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See LOC102226204 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 2 NC_036444.1 (30193612..30206918)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005374994.1 (514..4922)

Chromosome 2 - NC_036444.1Genomic Context describing neighboring genes Neighboring gene troponin I, fast skeletal muscle-like Neighboring gene troponin I, fast skeletal muscle-like Neighboring gene troponin I, fast skeletal muscle-like Neighboring gene uncharacterized LOC111611465 Neighboring gene lymphocyte specific protein 1 a Neighboring gene proline rich 33

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of troponin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
troponin I, fast skeletal muscle-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036444.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    30193612..30206918
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023348317.1 → XP_023204085.1  troponin I, fast skeletal muscle-like

    UniProtKB/TrEMBL
    A0A3B5QM30
    Conserved Domains (1) summary
    pfam00992
    Location:12 → 141
    Troponin

  2. XM_023348318.1 → XP_023204086.1  troponin I, fast skeletal muscle-like

    UniProtKB/TrEMBL
    A0A3B5QM30
    Conserved Domains (1) summary
    pfam00992
    Location:12 → 141
    Troponin
Nucleotide Protein Strain
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