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tent4a terminal nucleotidyltransferase 4A [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102222718, updated on 10-Mar-2024

Summary

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Gene symbol
tent4a
Gene description
terminal nucleotidyltransferase 4A
See related
Ensembl:ENSXMAG00000013580
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Also known as
papd7
Orthologs
human zebrafish all
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Genomic context

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See tent4a in Genome Data Viewer
Location:
chromosome: 13
Exon count:
13
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 13 NC_036455.1 (17257841..17276550)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372426.1 (245884..261418, complement)

Chromosome 13 - NC_036455.1Genomic Context describing neighboring genes Neighboring gene NOP2/Sun RNA methyltransferase 2 Neighboring gene steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1) Neighboring gene adenylate cyclase 2b (brain) Neighboring gene cilia and flagella associated protein 90

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables poly(A) RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TRAMP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
non-canonical poly(A) RNA polymerase PAPD7
Names
poly(A) RNA polymerase D7, non-canonical

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036455.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    17257841..17276550
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014472526.2 → XP_014328012.2  non-canonical poly(A) RNA polymerase PAPD7 isoform X1

    Conserved Domains (1) summary
    cl27230
    Location:230 → 545
    PAP_assoc; Cid1 family poly A polymerase

  2. XM_023345390.1 → XP_023201158.1  non-canonical poly(A) RNA polymerase PAPD7 isoform X2

    UniProtKB/TrEMBL
    A0A3B5PWT2
    Related
    ENSXMAP00000022136.1, ENSXMAT00000037818.1
    Conserved Domains (1) summary
    cl27230
    Location:230 → 545
    PAP_assoc; Cid1 family poly A polymerase

  3. XM_023345391.1 → XP_023201159.1  non-canonical poly(A) RNA polymerase PAPD7 isoform X3

    Conserved Domains (1) summary
    cl27230
    Location:230 → 545
    PAP_assoc; Cid1 family poly A polymerase
Nucleotide Protein Strain
Heading Accession and Version

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