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LOC102222640 uncharacterized LOC102222640 [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102222640, updated on 26-Jun-2024

Summary

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Gene symbol
LOC102222640
Gene description
uncharacterized LOC102222640
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
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Genomic context

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See LOC102222640 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
17
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 13 NC_036455.1 (11752983..11760234, complement)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372395.1 (532352..538759, complement)

Chromosome 13 - NC_036455.1Genomic Context describing neighboring genes Neighboring gene C3a anaphylatoxin chemotactic receptor-like Neighboring gene C3a anaphylatoxin chemotactic receptor-like Neighboring gene uncharacterized LOC111610620 Neighboring gene uncharacterized LOC102222895

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC102222640

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036455.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    11752983..11760234 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023344417.1 → XP_023200185.1  uncharacterized protein LOC102222640

    Conserved Domains (2) summary
    cl11394
    Location:16 → 348
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
    cl26109
    Location:191 → 524
    Chitin_synth_2; Chitin synthase
Nucleotide Protein Strain
Heading Accession and Version

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