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LOC102222047 N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3-like [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102222047, updated on 22-Oct-2023

Summary

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Gene symbol
LOC102222047
Gene description
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3-like
See related
Ensembl:ENSXMAG00000027805
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
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Genomic context

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See LOC102222047 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
2
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 11 NC_036453.1 (21825648..21828288)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005373037.1 (2016..5724)

Chromosome 11 - NC_036453.1Genomic Context describing neighboring genes Neighboring gene oligophrenin 1 Neighboring gene androgen receptor Neighboring gene uncharacterized LOC111610004 Neighboring gene uncharacterized LOC111610005

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036453.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    21825648..21828288
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023342732.1 → XP_023198500.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3-like

    UniProtKB/TrEMBL
    A0A3B5QP60
    Related
    ENSXMAP00000033224.1, ENSXMAT00000041728.1
    Conserved Domains (1) summary
    cl21608
    Location:141 → 336
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein Strain
Heading Accession and Version

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