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gyg1a glycogenin 1a [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102221864, updated on 10-Mar-2024

Summary

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Gene symbol
gyg1a
Gene description
glycogenin 1a
See related
Ensembl:ENSXMAG00000009319
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
zebrafish all
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Genomic context

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See gyg1a in Genome Data Viewer
Location:
chromosome: 19
Exon count:
7
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 19 NC_036461.1 (18068214..18080392, complement)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372436.1 (512099..522752)

Chromosome 19 - NC_036461.1Genomic Context describing neighboring genes Neighboring gene Ig kappa chain V-III region MOPC 63-like Neighboring gene immunoglobulin lambda constant 7-like Neighboring gene serine/threonine-protein kinase PAK 2-like Neighboring gene helicase-like transcription factor Neighboring gene plastin 1 (I isoform) Neighboring gene ATR serine/threonine kinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogenin-1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036461.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    18068214..18080392 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014472633.2 → XP_014328119.1  glycogenin-1-like isoform X2

    UniProtKB/TrEMBL
    A0A3B5Q598
    Related
    ENSXMAP00000026022.1, ENSXMAT00000020973.1
    Conserved Domains (1) summary
    cd02537
    Location:49 → 303
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  2. XM_023352271.1 → XP_023208039.1  glycogenin-1-like isoform X1

    UniProtKB/TrEMBL
    A0A3B5Q598
    Conserved Domains (1) summary
    cd02537
    Location:50 → 304
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
Nucleotide Protein Strain
Heading Accession and Version

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