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mrpl22 mitochondrial ribosomal protein L22 [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102220521, updated on 10-Mar-2024

Summary

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Gene symbol
mrpl22
Gene description
mitochondrial ribosomal protein L22
See related
Ensembl:ENSXMAG00000015564
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
human zebrafish all
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Genomic context

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See mrpl22 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
7
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 11 NC_036453.1 (10189136..10194771, complement)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372226.1 (1642529..1649558)

Chromosome 11 - NC_036453.1Genomic Context describing neighboring genes Neighboring gene rho GTPase-activating protein 7-like Neighboring gene sarcoglycan, delta (dystrophin-associated glycoprotein) Neighboring gene gem (nuclear organelle) associated protein 5 Neighboring gene CCR4-NOT transcription complex, subunit 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ribosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
39S ribosomal protein L22, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036453.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    10189136..10194771 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005800366.3 → XP_005800423.1  39S ribosomal protein L22, mitochondrial

    UniProtKB/TrEMBL
    A0A3B5REM9, M4AMA0
    Related
    ENSXMAP00000015594.1, ENSXMAT00000015617.2
    Conserved Domains (1) summary
    pfam00237
    Location:74 → 175
    Ribosomal_L22; Ribosomal protein L22p/L17e
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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