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zgc:158803 LUC7 domain-containing protein [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102220509, updated on 10-Mar-2024

Summary

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Gene symbol
zgc:158803
Gene description
LUC7 domain-containing protein
See related
Ensembl:ENSXMAG00000006903
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
zebrafish all
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Genomic context

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See zgc:158803 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
10
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 5 NC_036447.1 (10054611..10060557, complement)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372196.1 (3087678..3096123, complement)

Chromosome 5 - NC_036447.1Genomic Context describing neighboring genes Neighboring gene myoglobin Neighboring gene proliferation associated nuclear element Neighboring gene essential MCU regulator, mitochondrial-like Neighboring gene TRIO and F-actin-binding protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splice site recognition IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U1 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U2-type prespliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative RNA-binding protein Luc7-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036447.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    10054611..10060557 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005797510.3 → XP_005797567.1  putative RNA-binding protein Luc7-like 1

    UniProtKB/TrEMBL
    M3ZXI5
    Related
    ENSXMAP00000006929.1, ENSXMAT00000006937.2
    Conserved Domains (1) summary
    pfam03194
    Location:5 → 238
    LUC7; LUC7 N_terminus
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases