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ctbp1 C-terminal binding protein 1 [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102217139, updated on 10-Mar-2024

Summary

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Gene symbol
ctbp1
Gene description
C-terminal binding protein 1
See related
Ensembl:ENSXMAG00000008978
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
zebrafish all
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Genomic context

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See ctbp1 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
12
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 23 NC_036465.1 (18655010..18671273)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372182.1 (1942871..1956654)

Chromosome 23 - NC_036465.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein A/B Neighboring gene protein FAM53C-like Neighboring gene 5-phosphohydroxy-L-lysine phospho-lyase Neighboring gene spondin 2a, extracellular matrix protein Neighboring gene lysine (K)-specific demethylase 3B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036465.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    18655010..18671273
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005795322.3 → XP_005795379.1  C-terminal-binding protein 1-like isoform X1

    UniProtKB/TrEMBL
    A0A3B5RE79, M4A3F8
    Related
    ENSXMAP00000041475.1, ENSXMAT00000042509.1
    Conserved Domains (1) summary
    cd05299
    Location:35 → 353
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_023328788.1 → XP_023184556.1  C-terminal-binding protein 1-like isoform X1

    UniProtKB/TrEMBL
    A0A3B5RE79, M4A3F8
    Conserved Domains (1) summary
    cd05299
    Location:35 → 353
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_023328789.1 → XP_023184557.1  C-terminal-binding protein 1-like isoform X2

    UniProtKB/TrEMBL
    M4A3F8
    Related
    ENSXMAP00000009002.2, ENSXMAT00000009016.2
    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein Strain
Heading Accession and Version

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