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LOC102217069 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102217069, updated on 22-Oct-2023

Summary

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Gene symbol
LOC102217069
Gene description
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
See related
Ensembl:ENSXMAG00000022765
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Also known as
gcnt1
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Genomic context

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See LOC102217069 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
4
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 12 NC_036454.1 (16733805..16736896, complement)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372180.1 (6212910..6218440, complement)

Chromosome 12 - NC_036454.1Genomic Context describing neighboring genes Neighboring gene forkhead box B2 Neighboring gene prune homolog 2 with BCH domain Neighboring gene beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase-like Neighboring gene riboflavin kinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
Names
glucosaminyl (N-acetyl) transferase 1, core 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036454.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    16733805..16736896 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023344057.1 → XP_023199825.1  LOW QUALITY PROTEIN: beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase

    UniProtKB/TrEMBL
    A0A3B5RDE0
    Related
    ENSXMAP00000040994.1, ENSXMAT00000038240.1
    Conserved Domains (1) summary
    pfam02485
    Location:142 → 409
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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