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LOC102205261 elongation factor 1-alpha [ Pundamilia nyererei ]

Gene ID: 102205261, updated on 31-Jan-2024

Summary

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Gene symbol
LOC102205261
Gene description
elongation factor 1-alpha
See related
Ensembl:ENSPNYG00000007306
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
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Genomic context

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See LOC102205261 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187494.1 (2218508..2228288)

NW_005187494.1Genomic Context describing neighboring genes Neighboring gene sialin-like Neighboring gene uncharacterized LOC102205828 Neighboring gene elongation factor 1-alpha Neighboring gene cyclic GMP-AMP synthase-like Neighboring gene ribosomal protein L11

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005187494.1 Unplaced Scaffold Reference PunNye1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation elongation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translational elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
elongation factor 1-alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187494.1 Reference PunNye1.0

    Range
    2218508..2228288
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005739803.1 → XP_005739860.1  elongation factor 1-alpha

    UniProtKB/TrEMBL
    A0A3B4FIM9, A0A9Y3VMQ4
    Related
    ENSPNYP00000009639.1, ENSPNYT00000009865.1
    Conserved Domains (1) summary
    PTZ00141
    Location:1 → 461
    PTZ00141; elongation factor 1- alpha; Provisional
Nucleotide Protein
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