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fastkd1 FAST kinase domains 1 [ Pundamilia nyererei ]

Gene ID: 102202729, updated on 10-Mar-2024

Summary

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Gene symbol
fastkd1
Gene description
FAST kinase domains 1
See related
Ensembl:ENSPNYG00000006151
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
Orthologs
human zebrafish all
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Genomic context

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See fastkd1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187410.1 (4098534..4103516, complement)

NW_005187410.1Genomic Context describing neighboring genes Neighboring gene Bardet-Biedl syndrome 5 Neighboring gene kelch-like family member 41a Neighboring gene peptidylprolyl isomerase G (cyclophilin G) Neighboring gene cilia and flagella associated protein 210

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005187410.1 Unplaced Scaffold Reference PunNye1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of mitochondrial mRNA stability IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribonucleoprotein granule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
FAST kinase domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187410.1 Reference PunNye1.0

    Range
    4098534..4103516 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005723450.1 → XP_005723507.1  FAST kinase domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_005723507.1

    UniProtKB/TrEMBL
    A0A3B4FBZ2
    Conserved Domains (3) summary
    smart00952
    Location:766 → 825
    RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
    pfam06743
    Location:561 → 626
    FAST_1; FAST kinase-like protein, subdomain 1
    pfam08368
    Location:646 → 727
    FAST_2; FAST kinase-like protein, subdomain 2

  2. XM_005723452.1 → XP_005723509.1  FAST kinase domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A9Y3QLV7
    Conserved Domains (3) summary
    smart00952
    Location:737 → 796
    RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
    pfam06743
    Location:532 → 597
    FAST_1; FAST kinase-like protein, subdomain 1
    pfam08368
    Location:617 → 698
    FAST_2; FAST kinase-like protein, subdomain 2

  3. XM_005723449.1 → XP_005723506.1  FAST kinase domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_005723506.1

    UniProtKB/TrEMBL
    A0A3B4FBZ2
    Related
    ENSPNYP00000008095.1, ENSPNYT00000008293.1
    Conserved Domains (3) summary
    smart00952
    Location:766 → 825
    RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
    pfam06743
    Location:561 → 626
    FAST_1; FAST kinase-like protein, subdomain 1
    pfam08368
    Location:646 → 727
    FAST_2; FAST kinase-like protein, subdomain 2

  4. XM_005723451.2 → XP_005723508.1  FAST kinase domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_005723508.1

    UniProtKB/TrEMBL
    A0A3B4FBZ2
    Conserved Domains (3) summary
    smart00952
    Location:766 → 825
    RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
    pfam06743
    Location:561 → 626
    FAST_1; FAST kinase-like protein, subdomain 1
    pfam08368
    Location:646 → 727
    FAST_2; FAST kinase-like protein, subdomain 2
Nucleotide Protein
Heading Accession and Version

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