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eif3s6ip eukaryotic translation initiation factor 3, subunit 6 interacting protein [ Pundamilia nyererei ]

Gene ID: 102201849, updated on 10-Mar-2024

Summary

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Gene symbol
eif3s6ip
Gene description
eukaryotic translation initiation factor 3, subunit 6 interacting protein
See related
Ensembl:ENSPNYG00000012524
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
Also known as
eif3l
Orthologs
human zebrafish all
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Genomic context

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See eif3s6ip in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187521.1 (149332..154229)

NW_005187521.1Genomic Context describing neighboring genes Neighboring gene dishevelled-binding antagonist of beta-catenin 2 Neighboring gene SPARC related modular calcium binding 2 Neighboring gene cadherin-related 23 Neighboring gene chromosome unknown open reading frame, human C10orf105 Neighboring gene V-set immunoregulatory receptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005187521.1 Unplaced Scaffold Reference PunNye1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of eukaryotic translation initiation factor 3 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 3 subunit L

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187521.1 Reference PunNye1.0

    Range
    149332..154229
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005742365.1 → XP_005742422.1  eukaryotic translation initiation factor 3 subunit L

    See identical proteins and their annotated locations for XP_005742422.1

    UniProtKB/TrEMBL
    A0A3B4G489
    Related
    ENSPNYP00000016558.1, ENSPNYT00000016968.1
    Conserved Domains (1) summary
    pfam10255
    Location:147 → 545
    Paf67; RNA polymerase I-associated factor PAF67
Nucleotide Protein
Heading Accession and Version

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