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mrpl27 mitochondrial ribosomal protein L27 [ Pundamilia nyererei ]

Gene ID: 102199026, updated on 10-Mar-2024

Summary

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Gene symbol
mrpl27
Gene description
mitochondrial ribosomal protein L27
See related
Ensembl:ENSPNYG00000008975
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
Orthologs
human zebrafish all
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Genomic context

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See mrpl27 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187406.1 (7949025..7952182, complement)

NW_005187406.1Genomic Context describing neighboring genes Neighboring gene Na(+)/H(+) exchange regulatory cofactor NHE-RF1-like Neighboring gene ras-related protein Rab-37-like Neighboring gene essential meiotic structure-specific endonuclease 1 Neighboring gene carbonic anhydrase Xa

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005187406.1 Unplaced Scaffold Reference PunNye1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
39S ribosomal protein L27, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187406.1 Reference PunNye1.0

    Range
    7949025..7952182 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005721939.2 → XP_005721996.1  39S ribosomal protein L27, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_005721996.1

    UniProtKB/TrEMBL
    A0A9Y3QMJ9
    Conserved Domains (1) summary
    pfam01016
    Location:35 → 105
    Ribosomal_L27; Ribosomal L27 protein

  2. XM_005721938.2 → XP_005721995.1  39S ribosomal protein L27, mitochondrial isoform X2

    See identical proteins and their annotated locations for XP_005721995.1

    UniProtKB/TrEMBL
    A0A3B4FQA1
    Related
    ENSPNYP00000011838.1, ENSPNYT00000012123.1
    Conserved Domains (1) summary
    pfam01016
    Location:30 → 100
    Ribosomal_L27; Ribosomal L27 protein
Nucleotide Protein
Heading Accession and Version

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