U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

srsf5a serine and arginine rich splicing factor 5a [ Pundamilia nyererei ]

Gene ID: 102192163, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
srsf5a
Gene description
serine and arginine rich splicing factor 5a
See related
Ensembl:ENSPNYG00000021245
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
Also known as
srsf5
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See srsf5a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187580.1 (524190..529891)

NW_005187580.1Genomic Context describing neighboring genes Neighboring gene desumoylating isopeptidase 2 pseudogene Neighboring gene synaptojanin 2 binding protein Neighboring gene phosphofurin acidic cluster sorting protein 2 Neighboring gene ddb1 and cul4 associated factor 5

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_005187580.1 Unplaced Scaffold Reference PunNye1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
serine/arginine-rich splicing factor 5
Names
serine and arginine rich splicing factor 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187580.1 Reference PunNye1.0

    Range
    524190..529891
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005746501.2 → XP_005746558.1  serine/arginine-rich splicing factor 5

    See identical proteins and their annotated locations for XP_005746558.1

    UniProtKB/TrEMBL
    A0A3B4H3R5
    Related
    ENSPNYP00000028218.1, ENSPNYT00000028908.1
    Conserved Domains (2) summary
    cd12337
    Location:5 → 73
    RRM1_SRSF4_like; RNA recognition motif 1 in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
    cd12600
    Location:119 → 190
    RRM2_SRSF4_like; RNA recognition motif 2 in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.