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ITGB8 integrin subunit beta 8 [ Capra hircus (goat) ]

Gene ID: 102191301, updated on 1-Aug-2024

Summary

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Gene symbol
ITGB8
Gene description
integrin subunit beta 8
See related
EnsemblRapid:ENSCHIG00000019429
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See ITGB8 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
14
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 4 NC_030811.1 (91410508..91505570, complement)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 4 NC_022296.1 (26876176..26971303)

Chromosome 4 - NC_030811.1Genomic Context describing neighboring genes Neighboring gene Sp8 transcription factor Neighboring gene solute carrier family 25 member 39 pseudogene Neighboring gene ATP binding cassette subfamily B member 5 Neighboring gene 60S ribosomal protein L6 pseudogene Neighboring gene MET transcriptional regulator MACC1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Peri-implantation expression and regulation of ITGB8 in goat uterus. Bu LG, et al. Theriogenology, 2022 Mar 1. PMID 34973644
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Peri-implantation expression and regulation of ITGB8 in goat uterus.
    Title: Peri-implantation expression and regulation of ITGB8 in goat uterus.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin beta-8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030811.1 Reference ASM170441v1 Primary Assembly

    Range
    91410508..91505570 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005679027.3 → XP_005679084.2  integrin beta-8 isoform X2

    UniProtKB/TrEMBL
    A0A452F9Z5, A0AAJ6S1F9
    Related
    ENSCHIP00000020987.2, ENSCHIT00000028828.2

  2. XM_018047339.1 → XP_017902828.1  integrin beta-8 isoform X3

    UniProtKB/TrEMBL
    A0A452F9X6, A0A452F9Z5

  3. XM_013963182.2 → XP_013818636.2  integrin beta-8 isoform X1

    UniProtKB/TrEMBL
    A0A452F9L9, A0A452F9Z5
    Related
    ENSCHIP00000021000.2, ENSCHIT00000028841.2
Nucleotide Protein
Heading Accession and Version

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